Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx6Q8C7R7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx6Q8C7R7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx6Q8C7R7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Idnk-204ENSMUST00000226010 1898 ntBASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rfx6Q8C7R7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx6Q8C7R7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx6Q8C7R7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.02■□□□□ 0.47
Rfx6Q8C7R7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx6Q8C7R7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx6Q8C7R7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx6Q8C7R7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx6Q8C7R7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx6Q8C7R7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms