Protein–RNA interactions for Protein: Q8C7R2

Gm3411, Predicted gene 3411, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3411Q8C7R2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3411Q8C7R2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3411Q8C7R2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3411Q8C7R2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3411Q8C7R2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3411Q8C7R2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Gm12896-201ENSMUST00000118430 226 ntBASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3411Q8C7R2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3411Q8C7R2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3411Q8C7R2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3411Q8C7R2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Mir6982-201ENSMUST00000184354 68 ntBASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3411Q8C7R2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3411Q8C7R2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3411Q8C7R2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3411Q8C7R2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3411Q8C7R2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3411Q8C7R2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3411Q8C7R2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3411Q8C7R2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Gm3411Q8C7R2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms