Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Spcs1-204ENSMUST00000226782 949 ntBASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco3Q8BQM7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco3Q8BQM7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Smco3Q8BQM7 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Gm14117-201ENSMUST00000122417 843 ntBASIC14.64□□□□□ -0.07
Smco3Q8BQM7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.64□□□□□ -0.07
Smco3Q8BQM7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smco3Q8BQM7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Smco3Q8BQM7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms