Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rif1Q6PR54 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.95□□□□□ -0.02
Rif1Q6PR54 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rif1Q6PR54 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rif1Q6PR54 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rif1Q6PR54 Gm7638-201ENSMUST00000121348 967 ntBASIC14.95□□□□□ -0.02
Rif1Q6PR54 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rif1Q6PR54 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rif1Q6PR54 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rif1Q6PR54 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Gm26039-201ENSMUST00000158152 144 ntBASIC14.94□□□□□ -0.02
Rif1Q6PR54 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.94□□□□□ -0.02
Rif1Q6PR54 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rif1Q6PR54 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Psmb5-202ENSMUST00000227257 622 ntBASIC14.93□□□□□ -0.02
Rif1Q6PR54 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Gm11779-201ENSMUST00000118541 368 ntBASIC14.93□□□□□ -0.02
Rif1Q6PR54 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rif1Q6PR54 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.93□□□□□ -0.02
Rif1Q6PR54 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.92□□□□□ -0.02
Rif1Q6PR54 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.92□□□□□ -0.02
Rif1Q6PR54 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.92□□□□□ -0.02
Rif1Q6PR54 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Rif1Q6PR54 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.92□□□□□ -0.02
Rif1Q6PR54 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Gm6376-201ENSMUST00000209407 580 ntBASIC14.92□□□□□ -0.02
Rif1Q6PR54 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.92□□□□□ -0.02
Rif1Q6PR54 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rif1Q6PR54 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Gm27321-201ENSMUST00000185021 205 ntBASIC14.91□□□□□ -0.02
Rif1Q6PR54 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Gm7213-201ENSMUST00000215977 950 ntBASIC14.91□□□□□ -0.02
Rif1Q6PR54 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rif1Q6PR54 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Gm26308-201ENSMUST00000157768 69 ntBASIC14.9□□□□□ -0.02
Rif1Q6PR54 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Gm27000-201ENSMUST00000182943 842 ntBASIC14.9□□□□□ -0.02
Rif1Q6PR54 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms