Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.7■□□□□ 0.26
Sox17Q61473 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox17Q61473 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.69■□□□□ 0.26
Sox17Q61473 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.69■□□□□ 0.26
Sox17Q61473 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sox17Q61473 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Sox17Q61473 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sox17Q61473 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox17Q61473 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sox17Q61473 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sox17Q61473 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.68■□□□□ 0.26
Sox17Q61473 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sox17Q61473 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.68■□□□□ 0.26
Sox17Q61473 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sox17Q61473 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.68■□□□□ 0.26
Sox17Q61473 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox17Q61473 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.67■□□□□ 0.26
Sox17Q61473 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox17Q61473 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox17Q61473 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sox17Q61473 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox17Q61473 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox17Q61473 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox17Q61473 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sox17Q61473 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Sox17Q61473 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Sox17Q61473 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sox17Q61473 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.66■□□□□ 0.26
Sox17Q61473 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sox17Q61473 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.66■□□□□ 0.26
Sox17Q61473 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Sox17Q61473 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sox17Q61473 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox17Q61473 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms