Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gm7514-201ENSMUST00000209475 934 ntBASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-3Q5R1I1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Nespas-201ENSMUST00000143738 1083 ntBASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav7d-3Q5R1I1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav7d-3Q5R1I1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms