Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-3Q5R1C3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-3Q5R1C3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-3Q5R1C3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-3Q5R1C3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-3Q5R1C3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-3Q5R1C3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Gm22238-201ENSMUST00000175222 88 ntBASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-3Q5R1C3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav3-3Q5R1C3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms