Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.33■□□□□ 0.2
Urb1Q571H0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.33■□□□□ 0.2
Urb1Q571H0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.33■□□□□ 0.2
Urb1Q571H0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Urb1Q571H0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Urb1Q571H0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Urb1Q571H0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Urb1Q571H0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Urb1Q571H0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Urb1Q571H0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Urb1Q571H0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Urb1Q571H0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Urb1Q571H0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Gm22697-201ENSMUST00000175194 63 ntBASIC16.31■□□□□ 0.2
Urb1Q571H0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Urb1Q571H0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.3■□□□□ 0.2
Urb1Q571H0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.3■□□□□ 0.2
Urb1Q571H0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Urb1Q571H0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.3■□□□□ 0.2
Urb1Q571H0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Urb1Q571H0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Urb1Q571H0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.29■□□□□ 0.2
Urb1Q571H0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Gm17661-201ENSMUST00000170317 270 ntBASIC16.29■□□□□ 0.2
Urb1Q571H0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Urb1Q571H0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Urb1Q571H0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Urb1Q571H0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Urb1Q571H0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Urb1Q571H0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.29■□□□□ 0.2
Urb1Q571H0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.29■□□□□ 0.2
Urb1Q571H0 Gm27704-201ENSMUST00000185094 107 ntBASIC16.29■□□□□ 0.2
Urb1Q571H0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Urb1Q571H0 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.29■□□□□ 0.2
Urb1Q571H0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Urb1Q571H0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.28■□□□□ 0.2
Urb1Q571H0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.28■□□□□ 0.2
Urb1Q571H0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Urb1Q571H0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Urb1Q571H0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.28■□□□□ 0.2
Urb1Q571H0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.28■□□□□ 0.2
Urb1Q571H0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Urb1Q571H0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms