Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Gm8969-201ENSMUST00000199694 526 ntBASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cks1brtQ3UNC9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Gm10420-201ENSMUST00000121713 882 ntBASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cks1brtQ3UNC9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cks1brtQ3UNC9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms