Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.58■□□□□ 0.4
Crnkl1P63154 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Crnkl1P63154 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crnkl1P63154 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Crnkl1P63154 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.56■□□□□ 0.4
Crnkl1P63154 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Crnkl1P63154 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Crnkl1P63154 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.56■□□□□ 0.4
Crnkl1P63154 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crnkl1P63154 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Crnkl1P63154 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.55■□□□□ 0.4
Crnkl1P63154 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Crnkl1P63154 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Crnkl1P63154 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crnkl1P63154 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Crnkl1P63154 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.54■□□□□ 0.4
Crnkl1P63154 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crnkl1P63154 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Crnkl1P63154 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.53■□□□□ 0.4
Crnkl1P63154 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Crnkl1P63154 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Crnkl1P63154 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Crnkl1P63154 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Crnkl1P63154 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms