Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sox18P43680 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox18P43680 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox18P43680 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox18P43680 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Gm16061-201ENSMUST00000122167 857 ntBASIC16.98■□□□□ 0.31
Sox18P43680 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox18P43680 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sox18P43680 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.97■□□□□ 0.31
Sox18P43680 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.97■□□□□ 0.31
Sox18P43680 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox18P43680 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox18P43680 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sox18P43680 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.96■□□□□ 0.31
Sox18P43680 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.96■□□□□ 0.31
Sox18P43680 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sox18P43680 Gm18958-201ENSMUST00000174258 762 ntBASIC16.96■□□□□ 0.31
Sox18P43680 Gm29518-201ENSMUST00000190858 372 ntBASIC16.96■□□□□ 0.31
Sox18P43680 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.96■□□□□ 0.31
Sox18P43680 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox18P43680 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox18P43680 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sox18P43680 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox18P43680 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox18P43680 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox18P43680 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sox18P43680 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sox18P43680 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Gm9013-201ENSMUST00000132939 882 ntBASIC16.95■□□□□ 0.3
Sox18P43680 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.95■□□□□ 0.3
Sox18P43680 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Mzt1-203ENSMUST00000227948 952 ntBASIC16.95■□□□□ 0.3
Sox18P43680 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox18P43680 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sox18P43680 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Sox18P43680 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.94■□□□□ 0.3
Sox18P43680 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sox18P43680 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Gm6443-201ENSMUST00000203599 874 ntBASIC16.94■□□□□ 0.3
Sox18P43680 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox18P43680 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sox18P43680 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sox18P43680 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.93■□□□□ 0.3
Sox18P43680 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox18P43680 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox18P43680 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Sox18P43680 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox18P43680 Gm21559-201ENSMUST00000220638 855 ntBASIC16.92■□□□□ 0.3
Sox18P43680 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Gm8587-201ENSMUST00000076538 843 ntBASIC16.92■□□□□ 0.3
Sox18P43680 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms