Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.71□□□□□ -0.05
Abca1P41233 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Abca1P41233 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.71□□□□□ -0.05
Abca1P41233 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Abca1P41233 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.71□□□□□ -0.06
Abca1P41233 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Abca1P41233 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.71□□□□□ -0.06
Abca1P41233 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abca1P41233 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abca1P41233 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Abca1P41233 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca1P41233 Gm3375-201ENSMUST00000203929 796 ntBASIC14.7□□□□□ -0.06
Abca1P41233 Gm10138-203ENSMUST00000206952 366 ntBASIC14.7□□□□□ -0.06
Abca1P41233 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.7□□□□□ -0.06
Abca1P41233 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca1P41233 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca1P41233 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.7□□□□□ -0.06
Abca1P41233 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca1P41233 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Abca1P41233 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.7□□□□□ -0.06
Abca1P41233 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.69□□□□□ -0.06
Abca1P41233 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Abca1P41233 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.69□□□□□ -0.06
Abca1P41233 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Abca1P41233 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca1P41233 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.68□□□□□ -0.06
Abca1P41233 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.68□□□□□ -0.06
Abca1P41233 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Abca1P41233 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Abca1P41233 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Abca1P41233 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca1P41233 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Abca1P41233 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.68□□□□□ -0.06
Abca1P41233 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Abca1P41233 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Gm10013-201ENSMUST00000106074 672 ntBASIC14.67□□□□□ -0.06
Abca1P41233 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Abca1P41233 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Ank2-226ENSMUST00000189368 339 ntBASIC14.67□□□□□ -0.06
Abca1P41233 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.67□□□□□ -0.06
Abca1P41233 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.67□□□□□ -0.06
Abca1P41233 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.67□□□□□ -0.06
Abca1P41233 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.67□□□□□ -0.06
Abca1P41233 Gm12382-201ENSMUST00000122005 922 ntBASIC14.67□□□□□ -0.06
Abca1P41233 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms