Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Timp3P39876 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.53□□□□□ -0.08
Timp3P39876 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Timp3P39876 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Timp3P39876 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Timp3P39876 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Timp3P39876 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Timp3P39876 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Timp3P39876 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Timp3P39876 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Timp3P39876 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.52□□□□□ -0.09
Timp3P39876 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Timp3P39876 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Timp3P39876 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.51□□□□□ -0.09
Timp3P39876 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.51□□□□□ -0.09
Timp3P39876 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Timp3P39876 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Timp3P39876 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Gm10698-201ENSMUST00000182663 604 ntBASIC14.51□□□□□ -0.09
Timp3P39876 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.51□□□□□ -0.09
Timp3P39876 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.51□□□□□ -0.09
Timp3P39876 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Timp3P39876 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Timp3P39876 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Timp3P39876 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Timp3P39876 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.5□□□□□ -0.09
Timp3P39876 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.5□□□□□ -0.09
Timp3P39876 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.5□□□□□ -0.09
Timp3P39876 Mir6982-201ENSMUST00000184354 68 ntBASIC14.5□□□□□ -0.09
Timp3P39876 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.5□□□□□ -0.09
Timp3P39876 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Zfp783-201ENSMUST00000095946 670 ntBASIC14.5□□□□□ -0.09
Timp3P39876 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Timp3P39876 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Timp3P39876 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Timp3P39876 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Timp3P39876 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Timp3P39876 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Timp3P39876 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Timp3P39876 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.49□□□□□ -0.09
Timp3P39876 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.49□□□□□ -0.09
Timp3P39876 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Timp3P39876 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms