Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NdnP25233 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NdnP25233 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
NdnP25233 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.29□□□□□ -0.12
NdnP25233 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NdnP25233 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NdnP25233 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NdnP25233 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NdnP25233 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
NdnP25233 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NdnP25233 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.28□□□□□ -0.12
NdnP25233 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
NdnP25233 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Gm9870-201ENSMUST00000063874 645 ntBASIC14.28□□□□□ -0.12
NdnP25233 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.28□□□□□ -0.12
NdnP25233 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NdnP25233 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NdnP25233 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.27□□□□□ -0.12
NdnP25233 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
NdnP25233 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NdnP25233 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
NdnP25233 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NdnP25233 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.27□□□□□ -0.13
NdnP25233 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.27□□□□□ -0.13
NdnP25233 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NdnP25233 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NdnP25233 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NdnP25233 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NdnP25233 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.26□□□□□ -0.13
NdnP25233 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.26□□□□□ -0.13
NdnP25233 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.26□□□□□ -0.13
NdnP25233 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NdnP25233 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.26□□□□□ -0.13
NdnP25233 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
NdnP25233 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NdnP25233 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NdnP25233 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NdnP25233 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NdnP25233 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NdnP25233 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NdnP25233 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NdnP25233 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms