Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TP20293 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.69■□□□□ 0.26
TP20293 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TP20293 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TP20293 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.69■□□□□ 0.26
TP20293 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TP20293 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TP20293 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TP20293 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TP20293 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TP20293 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TP20293 Gm2399-201ENSMUST00000104944 225 ntBASIC16.68■□□□□ 0.26
TP20293 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TP20293 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.68■□□□□ 0.26
TP20293 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.68■□□□□ 0.26
TP20293 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TP20293 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TP20293 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.68■□□□□ 0.26
TP20293 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TP20293 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.67■□□□□ 0.26
TP20293 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TP20293 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.67■□□□□ 0.26
TP20293 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.67■□□□□ 0.26
TP20293 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TP20293 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.67■□□□□ 0.26
TP20293 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.67■□□□□ 0.26
TP20293 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TP20293 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.67■□□□□ 0.26
TP20293 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TP20293 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.67■□□□□ 0.26
TP20293 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.67■□□□□ 0.26
TP20293 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.67■□□□□ 0.26
TP20293 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.67■□□□□ 0.26
TP20293 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TP20293 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.66■□□□□ 0.26
TP20293 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.66■□□□□ 0.26
TP20293 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.66■□□□□ 0.26
TP20293 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.66■□□□□ 0.26
TP20293 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.66■□□□□ 0.26
TP20293 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TP20293 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TP20293 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.65■□□□□ 0.26
TP20293 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TP20293 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TP20293 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TP20293 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TP20293 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TP20293 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TP20293 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TP20293 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TP20293 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.64■□□□□ 0.25
TP20293 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TP20293 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TP20293 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TP20293 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.64■□□□□ 0.25
TP20293 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TP20293 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms