Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.88□□□□□ -0.03
Ercc1P07903 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ercc1P07903 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Ercc1P07903 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.88□□□□□ -0.03
Ercc1P07903 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ercc1P07903 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ercc1P07903 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ercc1P07903 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.87□□□□□ -0.03
Ercc1P07903 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.87□□□□□ -0.03
Ercc1P07903 Gm26833-201ENSMUST00000180899 440 ntBASIC14.87□□□□□ -0.03
Ercc1P07903 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc1P07903 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ercc1P07903 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ercc1P07903 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc1P07903 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ercc1P07903 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.86□□□□□ -0.03
Ercc1P07903 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.86□□□□□ -0.03
Ercc1P07903 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.86□□□□□ -0.03
Ercc1P07903 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.86□□□□□ -0.03
Ercc1P07903 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ercc1P07903 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.86□□□□□ -0.03
Ercc1P07903 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.86□□□□□ -0.03
Ercc1P07903 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc1P07903 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ercc1P07903 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ercc1P07903 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Gm6139-201ENSMUST00000079261 882 ntBASIC14.85□□□□□ -0.03
Ercc1P07903 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ercc1P07903 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc1P07903 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.84□□□□□ -0.03
Ercc1P07903 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Gm12251-201ENSMUST00000117893 792 ntBASIC14.84□□□□□ -0.03
Ercc1P07903 Smad6-203ENSMUST00000179458 273 ntBASIC14.84□□□□□ -0.03
Ercc1P07903 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ercc1P07903 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ercc1P07903 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ercc1P07903 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc1P07903 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms