Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.21■□□□□ 0.19
P01852 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.21■□□□□ 0.19
P01852 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.21■□□□□ 0.19
P01852 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.21■□□□□ 0.19
P01852 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Gm10138-203ENSMUST00000206952 366 ntBASIC16.21■□□□□ 0.19
P01852 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.21■□□□□ 0.19
P01852 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
P01852 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
P01852 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
P01852 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P01852 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Fst-202ENSMUST00000223640 2612 ntBASIC16.2■□□□□ 0.18
P01852 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
P01852 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.2■□□□□ 0.18
P01852 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.2■□□□□ 0.18
P01852 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Mtag2-201ENSMUST00000058665 714 ntBASIC16.2■□□□□ 0.18
P01852 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
P01852 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
P01852 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01852 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.2■□□□□ 0.18
P01852 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.2■□□□□ 0.18
P01852 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
P01852 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.19■□□□□ 0.18
P01852 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
P01852 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
P01852 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.19■□□□□ 0.18
P01852 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
P01852 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01852 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
P01852 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.18■□□□□ 0.18
P01852 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
P01852 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.18■□□□□ 0.18
P01852 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.18■□□□□ 0.18
P01852 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.18■□□□□ 0.18
P01852 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.18■□□□□ 0.18
P01852 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
P01852 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
P01852 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.18■□□□□ 0.18
P01852 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01852 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms