Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pde6dO55057 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pde6dO55057 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6dO55057 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.03□□□□□ -0.16
Pde6dO55057 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Pde6dO55057 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.03□□□□□ -0.16
Pde6dO55057 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pde6dO55057 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pde6dO55057 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.03□□□□□ -0.16
Pde6dO55057 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6dO55057 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pde6dO55057 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6dO55057 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6dO55057 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pde6dO55057 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6dO55057 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.02□□□□□ -0.16
Pde6dO55057 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6dO55057 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6dO55057 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.02□□□□□ -0.16
Pde6dO55057 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.02□□□□□ -0.17
Pde6dO55057 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6dO55057 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pde6dO55057 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pde6dO55057 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6dO55057 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.02□□□□□ -0.17
Pde6dO55057 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6dO55057 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6dO55057 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pde6dO55057 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6dO55057 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pde6dO55057 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6dO55057 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pde6dO55057 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.02□□□□□ -0.17
Pde6dO55057 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6dO55057 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.01□□□□□ -0.17
Pde6dO55057 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.01□□□□□ -0.17
Pde6dO55057 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.01□□□□□ -0.17
Pde6dO55057 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6dO55057 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Pde6dO55057 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pde6dO55057 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pde6dO55057 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pde6dO55057 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Gm19094-201ENSMUST00000209791 1246 ntBASIC14□□□□□ -0.17
Pde6dO55057 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
Pde6dO55057 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14□□□□□ -0.17
Pde6dO55057 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6dO55057 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms