Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.12■□□□□ 0.17
Matn3O35701 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Matn3O35701 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.12■□□□□ 0.17
Matn3O35701 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.12■□□□□ 0.17
Matn3O35701 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.12■□□□□ 0.17
Matn3O35701 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.12■□□□□ 0.17
Matn3O35701 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Matn3O35701 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.11■□□□□ 0.17
Matn3O35701 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Matn3O35701 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.11■□□□□ 0.17
Matn3O35701 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.11■□□□□ 0.17
Matn3O35701 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn3O35701 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.1■□□□□ 0.17
Matn3O35701 Gm6139-201ENSMUST00000079261 882 ntBASIC16.1■□□□□ 0.17
Matn3O35701 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Matn3O35701 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.1■□□□□ 0.17
Matn3O35701 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.1■□□□□ 0.17
Matn3O35701 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Matn3O35701 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Idnk-204ENSMUST00000226010 1898 ntBASIC16.1■□□□□ 0.17
Matn3O35701 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn3O35701 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Matn3O35701 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.09■□□□□ 0.17
Matn3O35701 Gm43137-201ENSMUST00000198052 594 ntBASIC16.09■□□□□ 0.17
Matn3O35701 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Matn3O35701 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.09■□□□□ 0.17
Matn3O35701 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.09■□□□□ 0.17
Matn3O35701 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn3O35701 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.08■□□□□ 0.17
Matn3O35701 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Matn3O35701 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.08■□□□□ 0.17
Matn3O35701 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Matn3O35701 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Matn3O35701 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Matn3O35701 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Matn3O35701 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Matn3O35701 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.08■□□□□ 0.16
Matn3O35701 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Matn3O35701 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Matn3O35701 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Matn3O35701 Gm8495-201ENSMUST00000188740 694 ntBASIC16.08■□□□□ 0.16
Matn3O35701 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn3O35701 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms