Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm22325-201ENSMUST00000158904 308 ntBASIC16.47■□□□□ 0.23
Hps1O08983 Gm27801-201ENSMUST00000184174 223 ntBASIC16.47■□□□□ 0.23
Hps1O08983 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Hps1O08983 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hps1O08983 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hps1O08983 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hps1O08983 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.47■□□□□ 0.23
Hps1O08983 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.46■□□□□ 0.23
Hps1O08983 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.46■□□□□ 0.23
Hps1O08983 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.46■□□□□ 0.23
Hps1O08983 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Hps1O08983 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.46■□□□□ 0.23
Hps1O08983 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.46■□□□□ 0.23
Hps1O08983 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hps1O08983 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hps1O08983 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hps1O08983 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hps1O08983 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.45■□□□□ 0.22
Hps1O08983 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hps1O08983 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hps1O08983 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.45■□□□□ 0.22
Hps1O08983 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hps1O08983 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Hps1O08983 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Hps1O08983 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hps1O08983 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hps1O08983 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hps1O08983 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.43■□□□□ 0.22
Hps1O08983 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.43■□□□□ 0.22
Hps1O08983 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hps1O08983 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps1O08983 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Hps1O08983 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hps1O08983 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.42■□□□□ 0.22
Hps1O08983 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms