Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Ube3aO08759 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ube3aO08759 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3aO08759 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.22■□□□□ 0.67
Ube3aO08759 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ube3aO08759 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3aO08759 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ube3aO08759 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ube3aO08759 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ube3aO08759 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3aO08759 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3aO08759 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.21■□□□□ 0.67
Ube3aO08759 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.21■□□□□ 0.67
Ube3aO08759 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.21■□□□□ 0.67
Ube3aO08759 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ube3aO08759 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Ube3aO08759 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.21■□□□□ 0.67
Ube3aO08759 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3aO08759 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.2■□□□□ 0.66
Ube3aO08759 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ube3aO08759 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.2■□□□□ 0.66
Ube3aO08759 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
Ube3aO08759 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.2■□□□□ 0.66
Ube3aO08759 Gm9988-201ENSMUST00000069786 435 ntBASIC19.2■□□□□ 0.66
Ube3aO08759 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ube3aO08759 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3aO08759 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ube3aO08759 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Reep4-203ENSMUST00000226563 1444 ntBASIC19.19■□□□□ 0.66
Ube3aO08759 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Ube3aO08759 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ube3aO08759 Gm10493-201ENSMUST00000097270 612 ntBASIC19.19■□□□□ 0.66
Ube3aO08759 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ube3aO08759 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3aO08759 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Ube3aO08759 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ube3aO08759 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3aO08759 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3aO08759 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ube3aO08759 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ube3aO08759 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Ube3aO08759 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.18■□□□□ 0.66
Ube3aO08759 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3aO08759 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3aO08759 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3aO08759 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3aO08759 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.17■□□□□ 0.66
Ube3aO08759 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Idnk-204ENSMUST00000226010 1898 ntBASIC19.17■□□□□ 0.66
Ube3aO08759 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.17■□□□□ 0.66
Ube3aO08759 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3aO08759 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3aO08759 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3aO08759 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms