Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Gm29791-202ENSMUST00000207888 369 ntBASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4lE9Q2N0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cpsf4lE9Q2N0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4lE9Q2N0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Gm42545-201ENSMUST00000202755 922 ntBASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Gm18025-201ENSMUST00000221733 862 ntBASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4lE9Q2N0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Gm10418-201ENSMUST00000100943 576 ntBASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Gm13168-201ENSMUST00000121771 632 ntBASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Spcs1-207ENSMUST00000228767 1008 ntBASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4lE9Q2N0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4lE9Q2N0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms