Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-2D3Z4R4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-2D3Z4R4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-2D3Z4R4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-2D3Z4R4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx6-2D3Z4R4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx6-2D3Z4R4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-2D3Z4R4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-2D3Z4R4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nkx6-2D3Z4R4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-2D3Z4R4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-2D3Z4R4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-2D3Z4R4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms