Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Golph3-205ENSMUST00000228671 2842 ntBASIC14.92□□□□□ -0.02
Col6a4A2AX52 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Gm25925-201ENSMUST00000158314 306 ntBASIC14.92□□□□□ -0.02
Col6a4A2AX52 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a4A2AX52 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.91□□□□□ -0.02
Col6a4A2AX52 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Gm7153-201ENSMUST00000117092 455 ntBASIC14.91□□□□□ -0.02
Col6a4A2AX52 Gm16061-201ENSMUST00000122167 857 ntBASIC14.91□□□□□ -0.02
Col6a4A2AX52 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.91□□□□□ -0.02
Col6a4A2AX52 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.91□□□□□ -0.02
Col6a4A2AX52 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Gm29518-201ENSMUST00000190858 372 ntBASIC14.9□□□□□ -0.02
Col6a4A2AX52 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a4A2AX52 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col6a4A2AX52 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.89□□□□□ -0.03
Col6a4A2AX52 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Col6a4A2AX52 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a4A2AX52 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms