Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Igkv3-5A0A140T8M6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.21□□□□□ -0.61
Igkv3-5A0A140T8M6 Dmtn-210ENSMUST00000228824 2377 ntBASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv3-5A0A140T8M6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Grk6-206ENSMUST00000224995 2971 ntBASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Reep4-203ENSMUST00000226563 1444 ntBASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Gm43213-201ENSMUST00000151866 1790 ntBASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv3-5A0A140T8M6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv3-5A0A140T8M6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms