Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv8-28A0A0G2JE47 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv8-28A0A0G2JE47 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv8-28A0A0G2JE47 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm8770-201ENSMUST00000121113 1109 ntBASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-28A0A0G2JE47 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms