Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm5408-201ENSMUST00000197998 747 ntBASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.9□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav9n-2A0A0G2JDP3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Trav9n-2A0A0G2JDP3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-2A0A0G2JDP3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-2A0A0G2JDP3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-2A0A0G2JDP3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-2A0A0G2JDP3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-2A0A0G2JDP3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms