Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv20A0A0B4J1H5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm14117-201ENSMUST00000122417 843 ntBASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm45102-201ENSMUST00000207427 857 ntBASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv20A0A0B4J1H5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv20A0A0B4J1H5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms