Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-6A0A075B6B2 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm18671-201ENSMUST00000214826 683 ntBASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-6A0A075B6B2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-6A0A075B6B2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms