Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-3A0A075B6A4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-3A0A075B6A4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-3A0A075B6A4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-3A0A075B6A4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.27□□□□□ -0.28
Trav12d-3A0A075B6A4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav12d-3A0A075B6A4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-3A0A075B6A4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm43566-201ENSMUST00000196851 808 ntBASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav12d-3A0A075B6A4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms