Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-4-dv10A0A075B651 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-4-dv10A0A075B651 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-4-dv10A0A075B651 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-4-dv10A0A075B651 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4-4-dv10A0A075B651 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4-4-dv10A0A075B651 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav4-4-dv10A0A075B651 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4-4-dv10A0A075B651 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms