Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Gm7417-201ENSMUST00000192950 473 ntBASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8-1A0A075B641 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8-1A0A075B641 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8-1A0A075B641 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8-1A0A075B641 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8-1A0A075B641 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8-1A0A075B641 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Gm15820-201ENSMUST00000201566 728 ntBASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8-1A0A075B641 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms