Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Gm13158-201ENSMUST00000122007 736 ntBASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-1A0A075B606 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav13d-1A0A075B606 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-1A0A075B606 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-1A0A075B606 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Gm22325-201ENSMUST00000158904 308 ntBASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-1A0A075B606 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Gm44832-201ENSMUST00000208849 2303 ntBASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Gm9954-202ENSMUST00000198686 4725 ntBASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13□□□□□ -0.33
Trav13d-1A0A075B606 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Gm6576-201ENSMUST00000169678 883 ntBASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms