Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Shroom3Q9QXN0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.77■■□□□ 1.56
Shroom3Q9QXN0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Shroom3Q9QXN0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shroom3Q9QXN0 Gm8503-201ENSMUST00000118131 455 ntBASIC24.76■■□□□ 1.55
Shroom3Q9QXN0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shroom3Q9QXN0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Shroom3Q9QXN0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
Shroom3Q9QXN0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Shroom3Q9QXN0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Shroom3Q9QXN0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Shroom3Q9QXN0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Shroom3Q9QXN0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Shroom3Q9QXN0 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.72■■□□□ 1.55
Shroom3Q9QXN0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Shroom3Q9QXN0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Shroom3Q9QXN0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Shroom3Q9QXN0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.7■■□□□ 1.54
Shroom3Q9QXN0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.69■■□□□ 1.54
Shroom3Q9QXN0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Shroom3Q9QXN0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Shroom3Q9QXN0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Shroom3Q9QXN0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Shroom3Q9QXN0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shroom3Q9QXN0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shroom3Q9QXN0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
Shroom3Q9QXN0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.65■■□□□ 1.54
Shroom3Q9QXN0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Shroom3Q9QXN0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
Shroom3Q9QXN0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.64■■□□□ 1.53
Shroom3Q9QXN0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom3Q9QXN0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom3Q9QXN0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom3Q9QXN0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom3Q9QXN0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.6■■□□□ 1.53
Shroom3Q9QXN0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Shroom3Q9QXN0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom3Q9QXN0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Shroom3Q9QXN0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.59■■□□□ 1.53
Shroom3Q9QXN0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom3Q9QXN0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom3Q9QXN0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Shroom3Q9QXN0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Shroom3Q9QXN0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom3Q9QXN0 Gm6821-201ENSMUST00000107540 542 ntBASIC24.56■■□□□ 1.52
Shroom3Q9QXN0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Shroom3Q9QXN0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom3Q9QXN0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom3Q9QXN0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom3Q9QXN0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom3Q9QXN0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom3Q9QXN0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom3Q9QXN0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom3Q9QXN0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom3Q9QXN0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Shroom3Q9QXN0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Shroom3Q9QXN0 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.51■■□□□ 1.51
Shroom3Q9QXN0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom3Q9QXN0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom3Q9QXN0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.51■■□□□ 1.51
Shroom3Q9QXN0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom3Q9QXN0 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.5■■□□□ 1.51
Shroom3Q9QXN0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom3Q9QXN0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.49■■□□□ 1.51
Shroom3Q9QXN0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom3Q9QXN0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom3Q9QXN0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Shroom3Q9QXN0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.47■■□□□ 1.51
Shroom3Q9QXN0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom3Q9QXN0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom3Q9QXN0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom3Q9QXN0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Shroom3Q9QXN0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom3Q9QXN0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom3Q9QXN0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom3Q9QXN0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shroom3Q9QXN0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shroom3Q9QXN0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shroom3Q9QXN0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.4■■□□□ 1.5
Shroom3Q9QXN0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shroom3Q9QXN0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shroom3Q9QXN0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.4■■□□□ 1.5
Shroom3Q9QXN0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Shroom3Q9QXN0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom3Q9QXN0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom3Q9QXN0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom3Q9QXN0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom3Q9QXN0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom3Q9QXN0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Shroom3Q9QXN0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom3Q9QXN0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom3Q9QXN0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom3Q9QXN0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom3Q9QXN0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.33■■□□□ 1.49
Shroom3Q9QXN0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Shroom3Q9QXN0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Shroom3Q9QXN0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Shroom3Q9QXN0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Shroom3Q9QXN0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom3Q9QXN0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms