Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.65■□□□□ 0.9
Rbfox1Q9JJ43 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbfox1Q9JJ43 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbfox1Q9JJ43 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rbfox1Q9JJ43 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.64■□□□□ 0.89
Rbfox1Q9JJ43 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rbfox1Q9JJ43 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rbfox1Q9JJ43 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbfox1Q9JJ43 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbfox1Q9JJ43 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Rbfox1Q9JJ43 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbfox1Q9JJ43 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rbfox1Q9JJ43 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rbfox1Q9JJ43 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.59■□□□□ 0.89
Rbfox1Q9JJ43 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbfox1Q9JJ43 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.59■□□□□ 0.89
Rbfox1Q9JJ43 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbfox1Q9JJ43 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbfox1Q9JJ43 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbfox1Q9JJ43 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbfox1Q9JJ43 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rbfox1Q9JJ43 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rbfox1Q9JJ43 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rbfox1Q9JJ43 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbfox1Q9JJ43 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbfox1Q9JJ43 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbfox1Q9JJ43 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rbfox1Q9JJ43 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbfox1Q9JJ43 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rbfox1Q9JJ43 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.55■□□□□ 0.88
Rbfox1Q9JJ43 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbfox1Q9JJ43 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.55■□□□□ 0.88
Rbfox1Q9JJ43 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbfox1Q9JJ43 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rbfox1Q9JJ43 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rbfox1Q9JJ43 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rbfox1Q9JJ43 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.53■□□□□ 0.88
Rbfox1Q9JJ43 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rbfox1Q9JJ43 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rbfox1Q9JJ43 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbfox1Q9JJ43 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.52■□□□□ 0.88
Rbfox1Q9JJ43 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rbfox1Q9JJ43 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rbfox1Q9JJ43 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rbfox1Q9JJ43 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbfox1Q9JJ43 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rbfox1Q9JJ43 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rbfox1Q9JJ43 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbfox1Q9JJ43 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rbfox1Q9JJ43 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbfox1Q9JJ43 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbfox1Q9JJ43 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rbfox1Q9JJ43 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbfox1Q9JJ43 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.45■□□□□ 0.86
Rbfox1Q9JJ43 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rbfox1Q9JJ43 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbfox1Q9JJ43 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rbfox1Q9JJ43 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbfox1Q9JJ43 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rbfox1Q9JJ43 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rbfox1Q9JJ43 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbfox1Q9JJ43 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbfox1Q9JJ43 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Rbfox1Q9JJ43 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rbfox1Q9JJ43 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbfox1Q9JJ43 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbfox1Q9JJ43 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbfox1Q9JJ43 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rbfox1Q9JJ43 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rbfox1Q9JJ43 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.38■□□□□ 0.85
Rbfox1Q9JJ43 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbfox1Q9JJ43 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbfox1Q9JJ43 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbfox1Q9JJ43 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rbfox1Q9JJ43 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbfox1Q9JJ43 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbfox1Q9JJ43 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbfox1Q9JJ43 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rbfox1Q9JJ43 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rbfox1Q9JJ43 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbfox1Q9JJ43 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rbfox1Q9JJ43 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rbfox1Q9JJ43 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rbfox1Q9JJ43 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rbfox1Q9JJ43 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rbfox1Q9JJ43 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rbfox1Q9JJ43 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rbfox1Q9JJ43 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rbfox1Q9JJ43 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rbfox1Q9JJ43 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rbfox1Q9JJ43 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rbfox1Q9JJ43 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rbfox1Q9JJ43 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rbfox1Q9JJ43 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.31■□□□□ 0.84
Rbfox1Q9JJ43 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rbfox1Q9JJ43 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rbfox1Q9JJ43 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rbfox1Q9JJ43 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rbfox1Q9JJ43 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rbfox1Q9JJ43 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 189.7 ms