Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chchd1Q9CQA6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Chchd1Q9CQA6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chchd1Q9CQA6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chchd1Q9CQA6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chchd1Q9CQA6 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.36■□□□□ 0.53
Chchd1Q9CQA6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chchd1Q9CQA6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chchd1Q9CQA6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chchd1Q9CQA6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Chchd1Q9CQA6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chchd1Q9CQA6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chchd1Q9CQA6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chchd1Q9CQA6 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.35■□□□□ 0.53
Chchd1Q9CQA6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chchd1Q9CQA6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chchd1Q9CQA6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chchd1Q9CQA6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chchd1Q9CQA6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chchd1Q9CQA6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.32■□□□□ 0.52
Chchd1Q9CQA6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chchd1Q9CQA6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.32■□□□□ 0.52
Chchd1Q9CQA6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chchd1Q9CQA6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chchd1Q9CQA6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chchd1Q9CQA6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.3■□□□□ 0.52
Chchd1Q9CQA6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chchd1Q9CQA6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chchd1Q9CQA6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chchd1Q9CQA6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.3■□□□□ 0.52
Chchd1Q9CQA6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chchd1Q9CQA6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chchd1Q9CQA6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Chchd1Q9CQA6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chchd1Q9CQA6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chchd1Q9CQA6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chchd1Q9CQA6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Chchd1Q9CQA6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chchd1Q9CQA6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chchd1Q9CQA6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Chchd1Q9CQA6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chchd1Q9CQA6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chchd1Q9CQA6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.26■□□□□ 0.51
Chchd1Q9CQA6 Mipep-204ENSMUST00000225043 1548 ntBASIC18.25■□□□□ 0.51
Chchd1Q9CQA6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chchd1Q9CQA6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chchd1Q9CQA6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chchd1Q9CQA6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chchd1Q9CQA6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chchd1Q9CQA6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chchd1Q9CQA6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chchd1Q9CQA6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.22■□□□□ 0.51
Chchd1Q9CQA6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.22■□□□□ 0.51
Chchd1Q9CQA6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chchd1Q9CQA6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Chchd1Q9CQA6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chchd1Q9CQA6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chchd1Q9CQA6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Chchd1Q9CQA6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chchd1Q9CQA6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chchd1Q9CQA6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chchd1Q9CQA6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chchd1Q9CQA6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Chchd1Q9CQA6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chchd1Q9CQA6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chchd1Q9CQA6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chchd1Q9CQA6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chchd1Q9CQA6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chchd1Q9CQA6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Chchd1Q9CQA6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chchd1Q9CQA6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chchd1Q9CQA6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chchd1Q9CQA6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chchd1Q9CQA6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.16■□□□□ 0.5
Chchd1Q9CQA6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chchd1Q9CQA6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chchd1Q9CQA6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.15■□□□□ 0.5
Chchd1Q9CQA6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chchd1Q9CQA6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chchd1Q9CQA6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chchd1Q9CQA6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chchd1Q9CQA6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chchd1Q9CQA6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Chchd1Q9CQA6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chchd1Q9CQA6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chchd1Q9CQA6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chchd1Q9CQA6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chchd1Q9CQA6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chchd1Q9CQA6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.13■□□□□ 0.49
Chchd1Q9CQA6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chchd1Q9CQA6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chchd1Q9CQA6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chchd1Q9CQA6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms