Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx6-1Q99MA9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Nkx6-1Q99MA9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nkx6-1Q99MA9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nkx6-1Q99MA9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.25■■□□□ 1.31
Nkx6-1Q99MA9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nkx6-1Q99MA9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.24■■□□□ 1.31
Nkx6-1Q99MA9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.24■■□□□ 1.31
Nkx6-1Q99MA9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.24■■□□□ 1.31
Nkx6-1Q99MA9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nkx6-1Q99MA9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nkx6-1Q99MA9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nkx6-1Q99MA9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Nkx6-1Q99MA9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nkx6-1Q99MA9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nkx6-1Q99MA9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.18■■□□□ 1.3
Nkx6-1Q99MA9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Nkx6-1Q99MA9 Gm6311-201ENSMUST00000073790 878 ntBASIC23.18■■□□□ 1.3
Nkx6-1Q99MA9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nkx6-1Q99MA9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nkx6-1Q99MA9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nkx6-1Q99MA9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nkx6-1Q99MA9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.15■■□□□ 1.3
Nkx6-1Q99MA9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Nkx6-1Q99MA9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.14■■□□□ 1.29
Nkx6-1Q99MA9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nkx6-1Q99MA9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nkx6-1Q99MA9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Nkx6-1Q99MA9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Nkx6-1Q99MA9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nkx6-1Q99MA9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Nkx6-1Q99MA9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Nkx6-1Q99MA9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.09■■□□□ 1.29
Nkx6-1Q99MA9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Nkx6-1Q99MA9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nkx6-1Q99MA9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Nkx6-1Q99MA9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Nkx6-1Q99MA9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nkx6-1Q99MA9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.07■■□□□ 1.28
Nkx6-1Q99MA9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Nkx6-1Q99MA9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nkx6-1Q99MA9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nkx6-1Q99MA9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.04■■□□□ 1.28
Nkx6-1Q99MA9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nkx6-1Q99MA9 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.03■■□□□ 1.28
Nkx6-1Q99MA9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx6-1Q99MA9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.03■■□□□ 1.28
Nkx6-1Q99MA9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.03■■□□□ 1.28
Nkx6-1Q99MA9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx6-1Q99MA9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx6-1Q99MA9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx6-1Q99MA9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Nkx6-1Q99MA9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Nkx6-1Q99MA9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx6-1Q99MA9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx6-1Q99MA9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.01■■□□□ 1.27
Nkx6-1Q99MA9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.01■■□□□ 1.27
Nkx6-1Q99MA9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nkx6-1Q99MA9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Nkx6-1Q99MA9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nkx6-1Q99MA9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Nkx6-1Q99MA9 Gm6345-201ENSMUST00000180378 1691 ntBASIC23■■□□□ 1.27
Nkx6-1Q99MA9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23■■□□□ 1.27
Nkx6-1Q99MA9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.98■■□□□ 1.27
Nkx6-1Q99MA9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Nkx6-1Q99MA9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.98■■□□□ 1.27
Nkx6-1Q99MA9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nkx6-1Q99MA9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Nkx6-1Q99MA9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Nkx6-1Q99MA9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Nkx6-1Q99MA9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.95■■□□□ 1.26
Nkx6-1Q99MA9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nkx6-1Q99MA9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Nkx6-1Q99MA9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nkx6-1Q99MA9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Nkx6-1Q99MA9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.92■■□□□ 1.26
Nkx6-1Q99MA9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nkx6-1Q99MA9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nkx6-1Q99MA9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx6-1Q99MA9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Nkx6-1Q99MA9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx6-1Q99MA9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx6-1Q99MA9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nkx6-1Q99MA9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nkx6-1Q99MA9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nkx6-1Q99MA9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx6-1Q99MA9 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.86■■□□□ 1.25
Nkx6-1Q99MA9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx6-1Q99MA9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx6-1Q99MA9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Nkx6-1Q99MA9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Nkx6-1Q99MA9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Nkx6-1Q99MA9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.85■■□□□ 1.25
Nkx6-1Q99MA9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Nkx6-1Q99MA9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Nkx6-1Q99MA9 Particl-201ENSMUST00000205370 1560 ntBASIC22.84■■□□□ 1.25
Nkx6-1Q99MA9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nkx6-1Q99MA9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nkx6-1Q99MA9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Nkx6-1Q99MA9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms