Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Homer3Q99JP6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Homer3Q99JP6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Homer3Q99JP6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Homer3Q99JP6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.11■■□□□ 1.45
Homer3Q99JP6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Homer3Q99JP6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Homer3Q99JP6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Homer3Q99JP6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Homer3Q99JP6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Homer3Q99JP6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Homer3Q99JP6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Homer3Q99JP6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Homer3Q99JP6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Homer3Q99JP6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Homer3Q99JP6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Homer3Q99JP6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Homer3Q99JP6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Homer3Q99JP6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.05■■□□□ 1.44
Homer3Q99JP6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Homer3Q99JP6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Homer3Q99JP6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Homer3Q99JP6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Homer3Q99JP6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Homer3Q99JP6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Homer3Q99JP6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Homer3Q99JP6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Homer3Q99JP6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Homer3Q99JP6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Homer3Q99JP6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Homer3Q99JP6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Homer3Q99JP6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Homer3Q99JP6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Homer3Q99JP6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Homer3Q99JP6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Homer3Q99JP6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.01■■□□□ 1.43
Homer3Q99JP6 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.01■■□□□ 1.43
Homer3Q99JP6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.01■■□□□ 1.43
Homer3Q99JP6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Homer3Q99JP6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Homer3Q99JP6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24■■□□□ 1.43
Homer3Q99JP6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24■■□□□ 1.43
Homer3Q99JP6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Homer3Q99JP6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Homer3Q99JP6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Homer3Q99JP6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Homer3Q99JP6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Homer3Q99JP6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Homer3Q99JP6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Homer3Q99JP6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.96■■□□□ 1.43
Homer3Q99JP6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Homer3Q99JP6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Homer3Q99JP6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Homer3Q99JP6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Homer3Q99JP6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Homer3Q99JP6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Homer3Q99JP6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Homer3Q99JP6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Homer3Q99JP6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
Homer3Q99JP6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Homer3Q99JP6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Homer3Q99JP6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Homer3Q99JP6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Homer3Q99JP6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Homer3Q99JP6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Homer3Q99JP6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Homer3Q99JP6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Homer3Q99JP6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Homer3Q99JP6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Homer3Q99JP6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Homer3Q99JP6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Homer3Q99JP6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Homer3Q99JP6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.88■■□□□ 1.41
Homer3Q99JP6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Homer3Q99JP6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Homer3Q99JP6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Homer3Q99JP6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Homer3Q99JP6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Homer3Q99JP6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Homer3Q99JP6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Homer3Q99JP6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Homer3Q99JP6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Homer3Q99JP6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Homer3Q99JP6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Homer3Q99JP6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Homer3Q99JP6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Homer3Q99JP6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.82■■□□□ 1.4
Homer3Q99JP6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Homer3Q99JP6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Homer3Q99JP6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Homer3Q99JP6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Homer3Q99JP6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.8■■□□□ 1.4
Homer3Q99JP6 Gm16148-201ENSMUST00000119653 893 ntBASIC23.79■■□□□ 1.4
Homer3Q99JP6 Gm24804-201ENSMUST00000174982 85 ntBASIC23.78■■□□□ 1.4
Homer3Q99JP6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.78■■□□□ 1.4
Homer3Q99JP6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Homer3Q99JP6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Homer3Q99JP6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Homer3Q99JP6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Homer3Q99JP6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms