Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.53■■■□□ 2.16
Rfc4Q99J62 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rfc4Q99J62 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Rfc4Q99J62 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.5■■■□□ 2.15
Rfc4Q99J62 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Rfc4Q99J62 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Rfc4Q99J62 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.49■■■□□ 2.15
Rfc4Q99J62 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rfc4Q99J62 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Rfc4Q99J62 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.48■■■□□ 2.15
Rfc4Q99J62 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.48■■■□□ 2.15
Rfc4Q99J62 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.48■■■□□ 2.15
Rfc4Q99J62 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Rfc4Q99J62 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.46■■■□□ 2.15
Rfc4Q99J62 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Rfc4Q99J62 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rfc4Q99J62 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Rfc4Q99J62 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rfc4Q99J62 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Rfc4Q99J62 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rfc4Q99J62 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.44■■■□□ 2.14
Rfc4Q99J62 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rfc4Q99J62 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rfc4Q99J62 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rfc4Q99J62 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rfc4Q99J62 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rfc4Q99J62 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Rfc4Q99J62 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rfc4Q99J62 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.4■■■□□ 2.14
Rfc4Q99J62 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Rfc4Q99J62 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Rfc4Q99J62 Mir6538-201ENSMUST00000183713 110 ntBASIC28.38■■■□□ 2.13
Rfc4Q99J62 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rfc4Q99J62 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.37■■■□□ 2.13
Rfc4Q99J62 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.37■■■□□ 2.13
Rfc4Q99J62 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Rfc4Q99J62 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rfc4Q99J62 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rfc4Q99J62 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rfc4Q99J62 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Rfc4Q99J62 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Rfc4Q99J62 Gm11175-201ENSMUST00000116172 543 ntBASIC28.32■■■□□ 2.12
Rfc4Q99J62 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Rfc4Q99J62 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Rfc4Q99J62 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.32■■■□□ 2.12
Rfc4Q99J62 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rfc4Q99J62 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rfc4Q99J62 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rfc4Q99J62 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rfc4Q99J62 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Rfc4Q99J62 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.26■■■□□ 2.11
Rfc4Q99J62 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Rfc4Q99J62 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
Rfc4Q99J62 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Rfc4Q99J62 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.23■■■□□ 2.11
Rfc4Q99J62 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rfc4Q99J62 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rfc4Q99J62 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rfc4Q99J62 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rfc4Q99J62 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rfc4Q99J62 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rfc4Q99J62 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rfc4Q99J62 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rfc4Q99J62 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rfc4Q99J62 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Rfc4Q99J62 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rfc4Q99J62 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.18■■■□□ 2.1
Rfc4Q99J62 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rfc4Q99J62 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rfc4Q99J62 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.17■■■□□ 2.1
Rfc4Q99J62 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rfc4Q99J62 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rfc4Q99J62 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rfc4Q99J62 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
Rfc4Q99J62 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rfc4Q99J62 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Rfc4Q99J62 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.15■■■□□ 2.1
Rfc4Q99J62 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
Rfc4Q99J62 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rfc4Q99J62 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rfc4Q99J62 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rfc4Q99J62 Gm6311-201ENSMUST00000073790 878 ntBASIC28.13■■■□□ 2.09
Rfc4Q99J62 Cap2-205ENSMUST00000225824 1634 ntBASIC28.13■■■□□ 2.09
Rfc4Q99J62 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rfc4Q99J62 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.12■■■□□ 2.09
Rfc4Q99J62 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rfc4Q99J62 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.12■■■□□ 2.09
Rfc4Q99J62 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Rfc4Q99J62 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.1■■■□□ 2.09
Rfc4Q99J62 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.09■■■□□ 2.09
Rfc4Q99J62 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Rfc4Q99J62 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Rfc4Q99J62 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.08■■■□□ 2.09
Rfc4Q99J62 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rfc4Q99J62 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
Rfc4Q99J62 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
Rfc4Q99J62 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rfc4Q99J62 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rfc4Q99J62 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.04■■■□□ 2.08
Rfc4Q99J62 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms