Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptcd2Q8R3K3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptcd2Q8R3K3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Ptcd2Q8R3K3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.66■■□□□ 1.86
Ptcd2Q8R3K3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptcd2Q8R3K3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.64■■□□□ 1.86
Ptcd2Q8R3K3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.64■■□□□ 1.86
Ptcd2Q8R3K3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.62■■□□□ 1.85
Ptcd2Q8R3K3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Ptcd2Q8R3K3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Ptcd2Q8R3K3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.6■■□□□ 1.85
Ptcd2Q8R3K3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptcd2Q8R3K3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.6■■□□□ 1.85
Ptcd2Q8R3K3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ptcd2Q8R3K3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ptcd2Q8R3K3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.57■■□□□ 1.84
Ptcd2Q8R3K3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptcd2Q8R3K3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptcd2Q8R3K3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.56■■□□□ 1.84
Ptcd2Q8R3K3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd2Q8R3K3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptcd2Q8R3K3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.54■■□□□ 1.84
Ptcd2Q8R3K3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ptcd2Q8R3K3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.53■■□□□ 1.84
Ptcd2Q8R3K3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptcd2Q8R3K3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptcd2Q8R3K3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.52■■□□□ 1.84
Ptcd2Q8R3K3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptcd2Q8R3K3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd2Q8R3K3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd2Q8R3K3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ptcd2Q8R3K3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.5■■□□□ 1.83
Ptcd2Q8R3K3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Ptcd2Q8R3K3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.49■■□□□ 1.83
Ptcd2Q8R3K3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptcd2Q8R3K3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptcd2Q8R3K3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptcd2Q8R3K3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Gm11687-201ENSMUST00000118911 886 ntBASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ptcd2Q8R3K3 Scarna2-201ENSMUST00000157560 414 ntBASIC26.44■■□□□ 1.82
Ptcd2Q8R3K3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ptcd2Q8R3K3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.44■■□□□ 1.82
Ptcd2Q8R3K3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ptcd2Q8R3K3 Gm7332-201ENSMUST00000118351 454 ntBASIC26.43■■□□□ 1.82
Ptcd2Q8R3K3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Ptcd2Q8R3K3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Gm5812-201ENSMUST00000061073 957 ntBASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Gm9806-201ENSMUST00000051080 552 ntBASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ptcd2Q8R3K3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ptcd2Q8R3K3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.38■■□□□ 1.81
Ptcd2Q8R3K3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Gm4799-201ENSMUST00000095396 657 ntBASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ptcd2Q8R3K3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ptcd2Q8R3K3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ptcd2Q8R3K3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd2Q8R3K3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ptcd2Q8R3K3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ptcd2Q8R3K3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd2Q8R3K3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd2Q8R3K3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.31■■□□□ 1.8
Ptcd2Q8R3K3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptcd2Q8R3K3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.26■■□□□ 1.79
Ptcd2Q8R3K3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ptcd2Q8R3K3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Gm16437-201ENSMUST00000025669 507 ntBASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms