Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Col23a1Q8K4G2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Col23a1Q8K4G2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Col23a1Q8K4G2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Col23a1Q8K4G2 Gm6311-201ENSMUST00000073790 878 ntBASIC31.02■■■□□ 2.56
Col23a1Q8K4G2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Col23a1Q8K4G2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Col23a1Q8K4G2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.98■■■□□ 2.55
Col23a1Q8K4G2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Col23a1Q8K4G2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Col23a1Q8K4G2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.96■■■□□ 2.55
Col23a1Q8K4G2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Col23a1Q8K4G2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Col23a1Q8K4G2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.94■■■□□ 2.54
Col23a1Q8K4G2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.93■■■□□ 2.54
Col23a1Q8K4G2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
Col23a1Q8K4G2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Col23a1Q8K4G2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Col23a1Q8K4G2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.92■■■□□ 2.54
Col23a1Q8K4G2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Col23a1Q8K4G2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Col23a1Q8K4G2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Col23a1Q8K4G2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Col23a1Q8K4G2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Col23a1Q8K4G2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Col23a1Q8K4G2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Col23a1Q8K4G2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.87■■■□□ 2.53
Col23a1Q8K4G2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.86■■■□□ 2.53
Col23a1Q8K4G2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Col23a1Q8K4G2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.85■■■□□ 2.53
Col23a1Q8K4G2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
Col23a1Q8K4G2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Col23a1Q8K4G2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Col23a1Q8K4G2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.83■■■□□ 2.53
Col23a1Q8K4G2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.83■■■□□ 2.53
Col23a1Q8K4G2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Col23a1Q8K4G2 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.83■■■□□ 2.53
Col23a1Q8K4G2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Col23a1Q8K4G2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Col23a1Q8K4G2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.82■■■□□ 2.52
Col23a1Q8K4G2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Col23a1Q8K4G2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Col23a1Q8K4G2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.8■■■□□ 2.52
Col23a1Q8K4G2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Col23a1Q8K4G2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Col23a1Q8K4G2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Col23a1Q8K4G2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Col23a1Q8K4G2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Col23a1Q8K4G2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Col23a1Q8K4G2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Col23a1Q8K4G2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.74■■■□□ 2.51
Col23a1Q8K4G2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Col23a1Q8K4G2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Col23a1Q8K4G2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Col23a1Q8K4G2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Col23a1Q8K4G2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Col23a1Q8K4G2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
Col23a1Q8K4G2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Col23a1Q8K4G2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Col23a1Q8K4G2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Col23a1Q8K4G2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Col23a1Q8K4G2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.68■■■□□ 2.5
Col23a1Q8K4G2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Col23a1Q8K4G2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Col23a1Q8K4G2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Col23a1Q8K4G2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Col23a1Q8K4G2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Col23a1Q8K4G2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Col23a1Q8K4G2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Col23a1Q8K4G2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.61■■■□□ 2.49
Col23a1Q8K4G2 Gm12366-201ENSMUST00000121722 873 ntBASIC30.61■■■□□ 2.49
Col23a1Q8K4G2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.61■■■□□ 2.49
Col23a1Q8K4G2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.61■■■□□ 2.49
Col23a1Q8K4G2 Gm5786-201ENSMUST00000085368 882 ntBASIC30.61■■■□□ 2.49
Col23a1Q8K4G2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Col23a1Q8K4G2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Col23a1Q8K4G2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Col23a1Q8K4G2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Col23a1Q8K4G2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Col23a1Q8K4G2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Col23a1Q8K4G2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Col23a1Q8K4G2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Col23a1Q8K4G2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Col23a1Q8K4G2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Col23a1Q8K4G2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Col23a1Q8K4G2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Col23a1Q8K4G2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Col23a1Q8K4G2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Col23a1Q8K4G2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Col23a1Q8K4G2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Col23a1Q8K4G2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.53■■■□□ 2.48
Col23a1Q8K4G2 Scarna2-201ENSMUST00000157560 414 ntBASIC30.53■■■□□ 2.48
Col23a1Q8K4G2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Col23a1Q8K4G2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Col23a1Q8K4G2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Col23a1Q8K4G2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.52■■■□□ 2.48
Col23a1Q8K4G2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Col23a1Q8K4G2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Col23a1Q8K4G2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Col23a1Q8K4G2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms