Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC37,93■■■■□ 3,66
Abca8bQ8K440 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC37,91■■■■□ 3,66
Abca8bQ8K440 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC37,91■■■■□ 3,66
Abca8bQ8K440 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC37,9■■■■□ 3,66
Abca8bQ8K440 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC37,89■■■■□ 3,66
Abca8bQ8K440 Cap2-205ENSMUST00000225824 1634 ntBASIC37,89■■■■□ 3,66
Abca8bQ8K440 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC37,87■■■■□ 3,65
Abca8bQ8K440 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC37,86■■■■□ 3,65
Abca8bQ8K440 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC37,84■■■■□ 3,65
Abca8bQ8K440 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC37,82■■■■□ 3,64
Abca8bQ8K440 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC37,79■■■■□ 3,64
Abca8bQ8K440 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC37,77■■■■□ 3,64
Abca8bQ8K440 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC37,76■■■■□ 3,64
Abca8bQ8K440 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC37,75■■■■□ 3,63
Abca8bQ8K440 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC37,73■■■■□ 3,63
Abca8bQ8K440 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC37,7■■■■□ 3,63
Abca8bQ8K440 AC131739.1-201ENSMUST00000221692 1245 ntBASIC37,69■■■■□ 3,62
Abca8bQ8K440 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC37,69■■■■□ 3,62
Abca8bQ8K440 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC37,69■■■■□ 3,62
Abca8bQ8K440 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC37,68■■■■□ 3,62
Abca8bQ8K440 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC37,67■■■■□ 3,62
Abca8bQ8K440 Gm2415-204ENSMUST00000190235 2004 ntBASIC37,65■■■■□ 3,62
Abca8bQ8K440 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC37,65■■■■□ 3,62
Abca8bQ8K440 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC37,65■■■■□ 3,62
Abca8bQ8K440 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC37,64■■■■□ 3,62
Abca8bQ8K440 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC37,64■■■■□ 3,62
Abca8bQ8K440 Gm6345-201ENSMUST00000180378 1691 ntBASIC37,63■■■■□ 3,61
Abca8bQ8K440 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC37,62■■■■□ 3,61
Abca8bQ8K440 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC37,6■■■■□ 3,61
Abca8bQ8K440 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC37,6■■■■□ 3,61
Abca8bQ8K440 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC37,59■■■■□ 3,61
Abca8bQ8K440 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC37,58■■■■□ 3,61
Abca8bQ8K440 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC37,56■■■■□ 3,6
Abca8bQ8K440 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC37,56■■■■□ 3,6
Abca8bQ8K440 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC37,55■■■■□ 3,6
Abca8bQ8K440 AC167019.3-201ENSMUST00000228225 1266 ntBASIC37,54■■■■□ 3,6
Abca8bQ8K440 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC37,53■■■■□ 3,6
Abca8bQ8K440 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC37,52■■■■□ 3,6
Abca8bQ8K440 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC37,52■■■■□ 3,6
Abca8bQ8K440 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC37,51■■■■□ 3,6
Abca8bQ8K440 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC37,5■■■■□ 3,59
Abca8bQ8K440 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC37,5■■■■□ 3,59
Abca8bQ8K440 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC37,5■■■■□ 3,59
Abca8bQ8K440 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC37,49■■■■□ 3,59
Abca8bQ8K440 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC37,49■■■■□ 3,59
Abca8bQ8K440 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC37,48■■■■□ 3,59
Abca8bQ8K440 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC37,48■■■■□ 3,59
Abca8bQ8K440 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC37,47■■■■□ 3,59
Abca8bQ8K440 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC37,47■■■■□ 3,59
Abca8bQ8K440 Gm6311-201ENSMUST00000073790 878 ntBASIC37,47■■■■□ 3,59
Abca8bQ8K440 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC37,47■■■■□ 3,59
Abca8bQ8K440 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC37,47■■■■□ 3,59
Abca8bQ8K440 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC37,46■■■■□ 3,59
Abca8bQ8K440 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Abca8bQ8K440 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Abca8bQ8K440 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC37,46■■■■□ 3,59
Abca8bQ8K440 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC37,44■■■■□ 3,58
Abca8bQ8K440 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC37,43■■■■□ 3,58
Abca8bQ8K440 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC37,43■■■■□ 3,58
Abca8bQ8K440 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC37,43■■■■□ 3,58
Abca8bQ8K440 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC37,42■■■■□ 3,58
Abca8bQ8K440 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC37,42■■■■□ 3,58
Abca8bQ8K440 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC37,41■■■■□ 3,58
Abca8bQ8K440 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC37,4■■■■□ 3,58
Abca8bQ8K440 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC37,39■■■■□ 3,58
Abca8bQ8K440 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC37,36■■■■□ 3,57
Abca8bQ8K440 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC37,36■■■■□ 3,57
Abca8bQ8K440 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC37,35■■■■□ 3,57
Abca8bQ8K440 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC37,35■■■■□ 3,57
Abca8bQ8K440 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC37,34■■■■□ 3,57
Abca8bQ8K440 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC37,34■■■■□ 3,57
Abca8bQ8K440 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC37,34■■■■□ 3,57
Abca8bQ8K440 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC37,34■■■■□ 3,57
Abca8bQ8K440 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC37,33■■■■□ 3,57
Abca8bQ8K440 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC37,32■■■■□ 3,57
Abca8bQ8K440 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC37,32■■■■□ 3,56
Abca8bQ8K440 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC37,32■■■■□ 3,56
Abca8bQ8K440 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC37,31■■■■□ 3,56
Abca8bQ8K440 Gm6658-202ENSMUST00000209493 1885 ntBASIC37,29■■■■□ 3,56
Abca8bQ8K440 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC37,29■■■■□ 3,56
Abca8bQ8K440 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC37,29■■■■□ 3,56
Abca8bQ8K440 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC37,28■■■■□ 3,56
Abca8bQ8K440 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC37,28■■■■□ 3,56
Abca8bQ8K440 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC37,28■■■■□ 3,56
Abca8bQ8K440 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC37,27■■■■□ 3,56
Abca8bQ8K440 Particl-201ENSMUST00000205370 1560 ntBASIC37,27■■■■□ 3,56
Abca8bQ8K440 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC37,25■■■■□ 3,55
Abca8bQ8K440 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC37,25■■■■□ 3,55
Abca8bQ8K440 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC37,25■■■■□ 3,55
Abca8bQ8K440 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC37,25■■■■□ 3,55
Abca8bQ8K440 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC37,25■■■■□ 3,55
Abca8bQ8K440 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC37,23■■■■□ 3,55
Abca8bQ8K440 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC37,22■■■■□ 3,55
Abca8bQ8K440 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC37,22■■■■□ 3,55
Abca8bQ8K440 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC37,21■■■■□ 3,55
Abca8bQ8K440 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC37,21■■■■□ 3,55
Abca8bQ8K440 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC37,21■■■■□ 3,55
Abca8bQ8K440 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC37,19■■■■□ 3,54
Abca8bQ8K440 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC37,18■■■■□ 3,54
Abca8bQ8K440 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC37,17■■■■□ 3,54
Retrieved 100 of 76,532 protein–RNA pairs in 17,8 ms