Protein–RNA interactions for Protein: Q8CFD5

Ercc8, DNA excision repair protein ERCC-8, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc8Q8CFD5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc8Q8CFD5 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.5■□□□□ 0.71
Ercc8Q8CFD5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc8Q8CFD5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc8Q8CFD5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc8Q8CFD5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc8Q8CFD5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc8Q8CFD5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc8Q8CFD5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.47■□□□□ 0.71
Ercc8Q8CFD5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc8Q8CFD5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc8Q8CFD5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc8Q8CFD5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc8Q8CFD5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.46■□□□□ 0.71
Ercc8Q8CFD5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc8Q8CFD5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc8Q8CFD5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.45■□□□□ 0.7
Ercc8Q8CFD5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.45■□□□□ 0.7
Ercc8Q8CFD5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc8Q8CFD5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc8Q8CFD5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc8Q8CFD5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc8Q8CFD5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc8Q8CFD5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc8Q8CFD5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc8Q8CFD5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.42■□□□□ 0.7
Ercc8Q8CFD5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc8Q8CFD5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc8Q8CFD5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc8Q8CFD5 Zfp131-205ENSMUST00000223812 663 ntBASIC19.42■□□□□ 0.7
Ercc8Q8CFD5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc8Q8CFD5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc8Q8CFD5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc8Q8CFD5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc8Q8CFD5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc8Q8CFD5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc8Q8CFD5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc8Q8CFD5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.37■□□□□ 0.69
Ercc8Q8CFD5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc8Q8CFD5 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.36■□□□□ 0.69
Ercc8Q8CFD5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc8Q8CFD5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.35■□□□□ 0.69
Ercc8Q8CFD5 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.35■□□□□ 0.69
Ercc8Q8CFD5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ercc8Q8CFD5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc8Q8CFD5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc8Q8CFD5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc8Q8CFD5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc8Q8CFD5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc8Q8CFD5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.33■□□□□ 0.68
Ercc8Q8CFD5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc8Q8CFD5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc8Q8CFD5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc8Q8CFD5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc8Q8CFD5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ercc8Q8CFD5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc8Q8CFD5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.31■□□□□ 0.68
Ercc8Q8CFD5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc8Q8CFD5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Ercc8Q8CFD5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc8Q8CFD5 Gm9397-201ENSMUST00000200125 605 ntBASIC19.3■□□□□ 0.68
Ercc8Q8CFD5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc8Q8CFD5 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.3■□□□□ 0.68
Ercc8Q8CFD5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc8Q8CFD5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc8Q8CFD5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ercc8Q8CFD5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.29■□□□□ 0.68
Ercc8Q8CFD5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.29■□□□□ 0.68
Ercc8Q8CFD5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.28■□□□□ 0.68
Ercc8Q8CFD5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc8Q8CFD5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc8Q8CFD5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ercc8Q8CFD5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.27■□□□□ 0.68
Ercc8Q8CFD5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.27■□□□□ 0.68
Ercc8Q8CFD5 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.27■□□□□ 0.68
Ercc8Q8CFD5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ercc8Q8CFD5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ercc8Q8CFD5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc8Q8CFD5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc8Q8CFD5 Gm24970-201ENSMUST00000175582 82 ntBASIC19.25■□□□□ 0.67
Ercc8Q8CFD5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc8Q8CFD5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.24■□□□□ 0.67
Ercc8Q8CFD5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc8Q8CFD5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc8Q8CFD5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ercc8Q8CFD5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ercc8Q8CFD5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ercc8Q8CFD5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc8Q8CFD5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ercc8Q8CFD5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc8Q8CFD5 Gm45855-201ENSMUST00000212546 880 ntBASIC19.21■□□□□ 0.67
Ercc8Q8CFD5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc8Q8CFD5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc8Q8CFD5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc8Q8CFD5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc8Q8CFD5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc8Q8CFD5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc8Q8CFD5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc8Q8CFD5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc8Q8CFD5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms