Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC40.2■■■■■ 4.03
Pabpn1Q8CCS6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Pabpn1Q8CCS6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC40.17■■■■■ 4.02
Pabpn1Q8CCS6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Pabpn1Q8CCS6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC40.16■■■■■ 4.02
Pabpn1Q8CCS6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC40.15■■■■■ 4.02
Pabpn1Q8CCS6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
Pabpn1Q8CCS6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC40.14■■■■■ 4.02
Pabpn1Q8CCS6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC40.13■■■■■ 4.01
Pabpn1Q8CCS6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
Pabpn1Q8CCS6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC40.13■■■■■ 4.01
Pabpn1Q8CCS6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC40.12■■■■■ 4.01
Pabpn1Q8CCS6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC40.11■■■■■ 4.01
Pabpn1Q8CCS6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC40.1■■■■■ 4.01
Pabpn1Q8CCS6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
Pabpn1Q8CCS6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC40.05■■■■■ 4
Pabpn1Q8CCS6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC40.05■■■■■ 4
Pabpn1Q8CCS6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC40.04■■■■■ 4
Pabpn1Q8CCS6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC40.04■■■■■ 4
Pabpn1Q8CCS6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
Pabpn1Q8CCS6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC40.04■■■■■ 4
Pabpn1Q8CCS6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC40.02■■■■■ 4
Pabpn1Q8CCS6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC40.02■■■■■ 4
Pabpn1Q8CCS6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
Pabpn1Q8CCS6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC40.01■■■■■ 4
Pabpn1Q8CCS6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■□ 3.99
Pabpn1Q8CCS6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Pabpn1Q8CCS6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Pabpn1Q8CCS6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC39.99■■■■□ 3.99
Pabpn1Q8CCS6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC39.99■■■■□ 3.99
Pabpn1Q8CCS6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC39.98■■■■□ 3.99
Pabpn1Q8CCS6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC39.96■■■■□ 3.99
Pabpn1Q8CCS6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Pabpn1Q8CCS6 Scarna2-201ENSMUST00000157560 414 ntBASIC39.95■■■■□ 3.99
Pabpn1Q8CCS6 Gm6345-201ENSMUST00000180378 1691 ntBASIC39.95■■■■□ 3.99
Pabpn1Q8CCS6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Pabpn1Q8CCS6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Pabpn1Q8CCS6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
Pabpn1Q8CCS6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC39.94■■■■□ 3.98
Pabpn1Q8CCS6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
Pabpn1Q8CCS6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC39.93■■■■□ 3.98
Pabpn1Q8CCS6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC39.92■■■■□ 3.98
Pabpn1Q8CCS6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Pabpn1Q8CCS6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Pabpn1Q8CCS6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Pabpn1Q8CCS6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
Pabpn1Q8CCS6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Pabpn1Q8CCS6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
Pabpn1Q8CCS6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC39.89■■■■□ 3.98
Pabpn1Q8CCS6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Pabpn1Q8CCS6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Pabpn1Q8CCS6 Gm7332-201ENSMUST00000118351 454 ntBASIC39.88■■■■□ 3.97
Pabpn1Q8CCS6 Gm11687-201ENSMUST00000118911 886 ntBASIC39.88■■■■□ 3.97
Pabpn1Q8CCS6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
Pabpn1Q8CCS6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC39.87■■■■□ 3.97
Pabpn1Q8CCS6 Gm4799-201ENSMUST00000095396 657 ntBASIC39.87■■■■□ 3.97
Pabpn1Q8CCS6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Pabpn1Q8CCS6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Pabpn1Q8CCS6 Gm5812-201ENSMUST00000061073 957 ntBASIC39.83■■■■□ 3.97
Pabpn1Q8CCS6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
Pabpn1Q8CCS6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
Pabpn1Q8CCS6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC39.82■■■■□ 3.96
Pabpn1Q8CCS6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
Pabpn1Q8CCS6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC39.81■■■■□ 3.96
Pabpn1Q8CCS6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Pabpn1Q8CCS6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Pabpn1Q8CCS6 Gm9806-201ENSMUST00000051080 552 ntBASIC39.8■■■■□ 3.96
Pabpn1Q8CCS6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC39.79■■■■□ 3.96
Pabpn1Q8CCS6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC39.78■■■■□ 3.96
Pabpn1Q8CCS6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Pabpn1Q8CCS6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Pabpn1Q8CCS6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.95
Pabpn1Q8CCS6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Pabpn1Q8CCS6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC39.74■■■■□ 3.95
Pabpn1Q8CCS6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
Pabpn1Q8CCS6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC39.72■■■■□ 3.95
Pabpn1Q8CCS6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Pabpn1Q8CCS6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC39.68■■■■□ 3.94
Pabpn1Q8CCS6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC39.67■■■■□ 3.94
Pabpn1Q8CCS6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
Pabpn1Q8CCS6 Gm16437-201ENSMUST00000025669 507 ntBASIC39.67■■■■□ 3.94
Pabpn1Q8CCS6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Pabpn1Q8CCS6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC39.65■■■■□ 3.94
Pabpn1Q8CCS6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
Pabpn1Q8CCS6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Pabpn1Q8CCS6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC39.65■■■■□ 3.94
Pabpn1Q8CCS6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC39.63■■■■□ 3.93
Pabpn1Q8CCS6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC39.63■■■■□ 3.93
Pabpn1Q8CCS6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
Pabpn1Q8CCS6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC39.6■■■■□ 3.93
Pabpn1Q8CCS6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC39.6■■■■□ 3.93
Pabpn1Q8CCS6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
Pabpn1Q8CCS6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
Pabpn1Q8CCS6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
Pabpn1Q8CCS6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC39.58■■■■□ 3.93
Pabpn1Q8CCS6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
Pabpn1Q8CCS6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC39.56■■■■□ 3.92
Pabpn1Q8CCS6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC39.55■■■■□ 3.92
Pabpn1Q8CCS6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC39.54■■■■□ 3.92
Pabpn1Q8CCS6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms