Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf170Q8CBG9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf170Q8CBG9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf170Q8CBG9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.33■□□□□ 0.85
Rnf170Q8CBG9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf170Q8CBG9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf170Q8CBG9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf170Q8CBG9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf170Q8CBG9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf170Q8CBG9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf170Q8CBG9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf170Q8CBG9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rnf170Q8CBG9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rnf170Q8CBG9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf170Q8CBG9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf170Q8CBG9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rnf170Q8CBG9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf170Q8CBG9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf170Q8CBG9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.3■□□□□ 0.84
Rnf170Q8CBG9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf170Q8CBG9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf170Q8CBG9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf170Q8CBG9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.28■□□□□ 0.84
Rnf170Q8CBG9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf170Q8CBG9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf170Q8CBG9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf170Q8CBG9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf170Q8CBG9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf170Q8CBG9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf170Q8CBG9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf170Q8CBG9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf170Q8CBG9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rnf170Q8CBG9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf170Q8CBG9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf170Q8CBG9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf170Q8CBG9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.24■□□□□ 0.83
Rnf170Q8CBG9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Rnf170Q8CBG9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf170Q8CBG9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf170Q8CBG9 Zfp131-205ENSMUST00000223812 663 ntBASIC20.23■□□□□ 0.83
Rnf170Q8CBG9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf170Q8CBG9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf170Q8CBG9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf170Q8CBG9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf170Q8CBG9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf170Q8CBG9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf170Q8CBG9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf170Q8CBG9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf170Q8CBG9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Rnf170Q8CBG9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf170Q8CBG9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.19■□□□□ 0.82
Rnf170Q8CBG9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf170Q8CBG9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf170Q8CBG9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf170Q8CBG9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf170Q8CBG9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.18■□□□□ 0.82
Rnf170Q8CBG9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf170Q8CBG9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf170Q8CBG9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf170Q8CBG9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf170Q8CBG9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf170Q8CBG9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf170Q8CBG9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf170Q8CBG9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf170Q8CBG9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.15■□□□□ 0.82
Rnf170Q8CBG9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf170Q8CBG9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf170Q8CBG9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf170Q8CBG9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Rnf170Q8CBG9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf170Q8CBG9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf170Q8CBG9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf170Q8CBG9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf170Q8CBG9 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.13■□□□□ 0.81
Rnf170Q8CBG9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf170Q8CBG9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.12■□□□□ 0.81
Rnf170Q8CBG9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf170Q8CBG9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf170Q8CBG9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
Rnf170Q8CBG9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf170Q8CBG9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf170Q8CBG9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf170Q8CBG9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf170Q8CBG9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.09■□□□□ 0.81
Rnf170Q8CBG9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf170Q8CBG9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf170Q8CBG9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rnf170Q8CBG9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf170Q8CBG9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf170Q8CBG9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf170Q8CBG9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.08■□□□□ 0.81
Rnf170Q8CBG9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.08■□□□□ 0.81
Rnf170Q8CBG9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf170Q8CBG9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf170Q8CBG9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf170Q8CBG9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf170Q8CBG9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.06■□□□□ 0.8
Rnf170Q8CBG9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf170Q8CBG9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf170Q8CBG9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms