Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Chd9Q8BYH8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd9Q8BYH8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd9Q8BYH8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.84■□□□□ 0.77
Chd9Q8BYH8 Gm12366-201ENSMUST00000121722 873 ntBASIC19.84■□□□□ 0.77
Chd9Q8BYH8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.84■□□□□ 0.77
Chd9Q8BYH8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.84■□□□□ 0.77
Chd9Q8BYH8 Gm5786-201ENSMUST00000085368 882 ntBASIC19.84■□□□□ 0.77
Chd9Q8BYH8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd9Q8BYH8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chd9Q8BYH8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd9Q8BYH8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd9Q8BYH8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd9Q8BYH8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.81■□□□□ 0.76
Chd9Q8BYH8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd9Q8BYH8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd9Q8BYH8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.8■□□□□ 0.76
Chd9Q8BYH8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd9Q8BYH8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd9Q8BYH8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.79■□□□□ 0.76
Chd9Q8BYH8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd9Q8BYH8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd9Q8BYH8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd9Q8BYH8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd9Q8BYH8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chd9Q8BYH8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd9Q8BYH8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd9Q8BYH8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.78■□□□□ 0.76
Chd9Q8BYH8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd9Q8BYH8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.77■□□□□ 0.76
Chd9Q8BYH8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.77■□□□□ 0.75
Chd9Q8BYH8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd9Q8BYH8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.76■□□□□ 0.75
Chd9Q8BYH8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd9Q8BYH8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd9Q8BYH8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chd9Q8BYH8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.75■□□□□ 0.75
Chd9Q8BYH8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chd9Q8BYH8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd9Q8BYH8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.74■□□□□ 0.75
Chd9Q8BYH8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chd9Q8BYH8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd9Q8BYH8 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.73■□□□□ 0.75
Chd9Q8BYH8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd9Q8BYH8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd9Q8BYH8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd9Q8BYH8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Chd9Q8BYH8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chd9Q8BYH8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Chd9Q8BYH8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chd9Q8BYH8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Chd9Q8BYH8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.71■□□□□ 0.75
Chd9Q8BYH8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd9Q8BYH8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.71■□□□□ 0.75
Chd9Q8BYH8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.71■□□□□ 0.75
Chd9Q8BYH8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd9Q8BYH8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd9Q8BYH8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.7■□□□□ 0.74
Chd9Q8BYH8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.7■□□□□ 0.74
Chd9Q8BYH8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.69■□□□□ 0.74
Chd9Q8BYH8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd9Q8BYH8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd9Q8BYH8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd9Q8BYH8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chd9Q8BYH8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd9Q8BYH8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd9Q8BYH8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd9Q8BYH8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.66■□□□□ 0.74
Chd9Q8BYH8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd9Q8BYH8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd9Q8BYH8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd9Q8BYH8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd9Q8BYH8 Gm4799-201ENSMUST00000095396 657 ntBASIC19.64■□□□□ 0.73
Chd9Q8BYH8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Chd9Q8BYH8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.63■□□□□ 0.73
Chd9Q8BYH8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd9Q8BYH8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd9Q8BYH8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.62■□□□□ 0.73
Chd9Q8BYH8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.62■□□□□ 0.73
Chd9Q8BYH8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Chd9Q8BYH8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd9Q8BYH8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd9Q8BYH8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd9Q8BYH8 Gm15546-201ENSMUST00000122095 826 ntBASIC19.61■□□□□ 0.73
Chd9Q8BYH8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chd9Q8BYH8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Chd9Q8BYH8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chd9Q8BYH8 Gm7332-201ENSMUST00000118351 454 ntBASIC19.6■□□□□ 0.73
Chd9Q8BYH8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.58■□□□□ 0.73
Chd9Q8BYH8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chd9Q8BYH8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.58■□□□□ 0.72
Chd9Q8BYH8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd9Q8BYH8 Scarna2-201ENSMUST00000157560 414 ntBASIC19.57■□□□□ 0.72
Chd9Q8BYH8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd9Q8BYH8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.57■□□□□ 0.72
Chd9Q8BYH8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd9Q8BYH8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Chd9Q8BYH8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd9Q8BYH8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd9Q8BYH8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms