Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Col16a1Q8BLX7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Col16a1Q8BLX7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC33.36■■■□□ 2.93
Col16a1Q8BLX7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Col16a1Q8BLX7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Col16a1Q8BLX7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC33.35■■■□□ 2.93
Col16a1Q8BLX7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Col16a1Q8BLX7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Col16a1Q8BLX7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Col16a1Q8BLX7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
Col16a1Q8BLX7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Col16a1Q8BLX7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Col16a1Q8BLX7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC33.27■■■□□ 2.92
Col16a1Q8BLX7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.27■■■□□ 2.92
Col16a1Q8BLX7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
Col16a1Q8BLX7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC33.26■■■□□ 2.92
Col16a1Q8BLX7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC33.26■■■□□ 2.91
Col16a1Q8BLX7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
Col16a1Q8BLX7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC33.26■■■□□ 2.91
Col16a1Q8BLX7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC33.26■■■□□ 2.91
Col16a1Q8BLX7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Col16a1Q8BLX7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Col16a1Q8BLX7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
Col16a1Q8BLX7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC33.22■■■□□ 2.91
Col16a1Q8BLX7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Col16a1Q8BLX7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC33.21■■■□□ 2.91
Col16a1Q8BLX7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Col16a1Q8BLX7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Col16a1Q8BLX7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
Col16a1Q8BLX7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Col16a1Q8BLX7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
Col16a1Q8BLX7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
Col16a1Q8BLX7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Col16a1Q8BLX7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC33.14■■■□□ 2.9
Col16a1Q8BLX7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC33.14■■■□□ 2.9
Col16a1Q8BLX7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC33.13■■■□□ 2.89
Col16a1Q8BLX7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Col16a1Q8BLX7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Col16a1Q8BLX7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC33.11■■■□□ 2.89
Col16a1Q8BLX7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC33.1■■■□□ 2.89
Col16a1Q8BLX7 Cap2-205ENSMUST00000225824 1634 ntBASIC33.09■■■□□ 2.89
Col16a1Q8BLX7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Col16a1Q8BLX7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Col16a1Q8BLX7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC33.07■■■□□ 2.88
Col16a1Q8BLX7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Col16a1Q8BLX7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Col16a1Q8BLX7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Col16a1Q8BLX7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Col16a1Q8BLX7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC33.05■■■□□ 2.88
Col16a1Q8BLX7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Col16a1Q8BLX7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.03■■■□□ 2.88
Col16a1Q8BLX7 Gm6345-201ENSMUST00000180378 1691 ntBASIC33.02■■■□□ 2.88
Col16a1Q8BLX7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Col16a1Q8BLX7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Col16a1Q8BLX7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Col16a1Q8BLX7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.98■■■□□ 2.87
Col16a1Q8BLX7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Col16a1Q8BLX7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC32.98■■■□□ 2.87
Col16a1Q8BLX7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Col16a1Q8BLX7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Col16a1Q8BLX7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Col16a1Q8BLX7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
Col16a1Q8BLX7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Col16a1Q8BLX7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Col16a1Q8BLX7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Col16a1Q8BLX7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Col16a1Q8BLX7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Col16a1Q8BLX7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC32.91■■■□□ 2.86
Col16a1Q8BLX7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Col16a1Q8BLX7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Col16a1Q8BLX7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
Col16a1Q8BLX7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Col16a1Q8BLX7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Col16a1Q8BLX7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
Col16a1Q8BLX7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
Col16a1Q8BLX7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
Col16a1Q8BLX7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Col16a1Q8BLX7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
Col16a1Q8BLX7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC32.83■■■□□ 2.85
Col16a1Q8BLX7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Col16a1Q8BLX7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
Col16a1Q8BLX7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
Col16a1Q8BLX7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Col16a1Q8BLX7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
Col16a1Q8BLX7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Col16a1Q8BLX7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC32.78■■■□□ 2.84
Col16a1Q8BLX7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC32.78■■■□□ 2.84
Col16a1Q8BLX7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
Col16a1Q8BLX7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Col16a1Q8BLX7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Col16a1Q8BLX7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Col16a1Q8BLX7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
Col16a1Q8BLX7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Col16a1Q8BLX7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.74■■■□□ 2.83
Col16a1Q8BLX7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC32.74■■■□□ 2.83
Col16a1Q8BLX7 Gm6311-201ENSMUST00000073790 878 ntBASIC32.74■■■□□ 2.83
Col16a1Q8BLX7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
Col16a1Q8BLX7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Col16a1Q8BLX7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Col16a1Q8BLX7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms