Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Upk3bQ80YF6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upk3bQ80YF6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upk3bQ80YF6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upk3bQ80YF6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upk3bQ80YF6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upk3bQ80YF6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
Upk3bQ80YF6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk3bQ80YF6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk3bQ80YF6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Upk3bQ80YF6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Upk3bQ80YF6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upk3bQ80YF6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Upk3bQ80YF6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Upk3bQ80YF6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Upk3bQ80YF6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upk3bQ80YF6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Upk3bQ80YF6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk3bQ80YF6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Upk3bQ80YF6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk3bQ80YF6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Upk3bQ80YF6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk3bQ80YF6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upk3bQ80YF6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Upk3bQ80YF6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.36■□□□□ 0.85
Upk3bQ80YF6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Upk3bQ80YF6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk3bQ80YF6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk3bQ80YF6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Upk3bQ80YF6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Upk3bQ80YF6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Upk3bQ80YF6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk3bQ80YF6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Upk3bQ80YF6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk3bQ80YF6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk3bQ80YF6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk3bQ80YF6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Upk3bQ80YF6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk3bQ80YF6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Upk3bQ80YF6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.32■□□□□ 0.84
Upk3bQ80YF6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk3bQ80YF6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk3bQ80YF6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk3bQ80YF6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.32■□□□□ 0.84
Upk3bQ80YF6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk3bQ80YF6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.31■□□□□ 0.84
Upk3bQ80YF6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Upk3bQ80YF6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Upk3bQ80YF6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Upk3bQ80YF6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Upk3bQ80YF6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Upk3bQ80YF6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Upk3bQ80YF6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Upk3bQ80YF6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Upk3bQ80YF6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk3bQ80YF6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Upk3bQ80YF6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk3bQ80YF6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Upk3bQ80YF6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Upk3bQ80YF6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Upk3bQ80YF6 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.27■□□□□ 0.83
Upk3bQ80YF6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Upk3bQ80YF6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Upk3bQ80YF6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Upk3bQ80YF6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Upk3bQ80YF6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Upk3bQ80YF6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Upk3bQ80YF6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Upk3bQ80YF6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Upk3bQ80YF6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Upk3bQ80YF6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Upk3bQ80YF6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upk3bQ80YF6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bQ80YF6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bQ80YF6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bQ80YF6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bQ80YF6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bQ80YF6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bQ80YF6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.2■□□□□ 0.82
Upk3bQ80YF6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bQ80YF6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.19■□□□□ 0.82
Upk3bQ80YF6 Gm16148-201ENSMUST00000119653 893 ntBASIC20.19■□□□□ 0.82
Upk3bQ80YF6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bQ80YF6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Upk3bQ80YF6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bQ80YF6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.19■□□□□ 0.82
Upk3bQ80YF6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bQ80YF6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bQ80YF6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bQ80YF6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bQ80YF6 Gm24804-201ENSMUST00000174982 85 ntBASIC20.17■□□□□ 0.82
Upk3bQ80YF6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms