Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.38■■□□□ 1.65
Tnrc18Q80WC3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Tnrc18Q80WC3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Tnrc18Q80WC3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.35■■□□□ 1.65
Tnrc18Q80WC3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Tnrc18Q80WC3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Tnrc18Q80WC3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.34■■□□□ 1.65
Tnrc18Q80WC3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Tnrc18Q80WC3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Tnrc18Q80WC3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Tnrc18Q80WC3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Tnrc18Q80WC3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Tnrc18Q80WC3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Tnrc18Q80WC3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tnrc18Q80WC3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.31■■□□□ 1.64
Tnrc18Q80WC3 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.3■■□□□ 1.64
Tnrc18Q80WC3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tnrc18Q80WC3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tnrc18Q80WC3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tnrc18Q80WC3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tnrc18Q80WC3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tnrc18Q80WC3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.29■■□□□ 1.64
Tnrc18Q80WC3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnrc18Q80WC3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.27■■□□□ 1.64
Tnrc18Q80WC3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Tnrc18Q80WC3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Tnrc18Q80WC3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.25■■□□□ 1.63
Tnrc18Q80WC3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Tnrc18Q80WC3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.23■■□□□ 1.63
Tnrc18Q80WC3 Gm6311-201ENSMUST00000073790 878 ntBASIC25.23■■□□□ 1.63
Tnrc18Q80WC3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.22■■□□□ 1.63
Tnrc18Q80WC3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Tnrc18Q80WC3 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.22■■□□□ 1.63
Tnrc18Q80WC3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tnrc18Q80WC3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tnrc18Q80WC3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tnrc18Q80WC3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tnrc18Q80WC3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Tnrc18Q80WC3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Tnrc18Q80WC3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tnrc18Q80WC3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
Tnrc18Q80WC3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tnrc18Q80WC3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.18■■□□□ 1.62
Tnrc18Q80WC3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tnrc18Q80WC3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Tnrc18Q80WC3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.16■■□□□ 1.62
Tnrc18Q80WC3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tnrc18Q80WC3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Tnrc18Q80WC3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.15■■□□□ 1.62
Tnrc18Q80WC3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tnrc18Q80WC3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Tnrc18Q80WC3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Tnrc18Q80WC3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tnrc18Q80WC3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tnrc18Q80WC3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tnrc18Q80WC3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Tnrc18Q80WC3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.11■■□□□ 1.61
Tnrc18Q80WC3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tnrc18Q80WC3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tnrc18Q80WC3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tnrc18Q80WC3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tnrc18Q80WC3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Tnrc18Q80WC3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.09■■□□□ 1.61
Tnrc18Q80WC3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
Tnrc18Q80WC3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Tnrc18Q80WC3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Tnrc18Q80WC3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Tnrc18Q80WC3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Tnrc18Q80WC3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.06■■□□□ 1.6
Tnrc18Q80WC3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.04■■□□□ 1.6
Tnrc18Q80WC3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Tnrc18Q80WC3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Tnrc18Q80WC3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.03■■□□□ 1.6
Tnrc18Q80WC3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tnrc18Q80WC3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tnrc18Q80WC3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tnrc18Q80WC3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25■■□□□ 1.59
Tnrc18Q80WC3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Tnrc18Q80WC3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Tnrc18Q80WC3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Tnrc18Q80WC3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Tnrc18Q80WC3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Tnrc18Q80WC3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tnrc18Q80WC3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tnrc18Q80WC3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tnrc18Q80WC3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Tnrc18Q80WC3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tnrc18Q80WC3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tnrc18Q80WC3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tnrc18Q80WC3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Tnrc18Q80WC3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tnrc18Q80WC3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tnrc18Q80WC3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tnrc18Q80WC3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tnrc18Q80WC3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tnrc18Q80WC3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Tnrc18Q80WC3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tnrc18Q80WC3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Tnrc18Q80WC3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.91■■□□□ 1.58
Tnrc18Q80WC3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.91■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms