Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Sh3tc2Q80VA5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sh3tc2Q80VA5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
Sh3tc2Q80VA5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.62■■□□□ 1.85
Sh3tc2Q80VA5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sh3tc2Q80VA5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Sh3tc2Q80VA5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Sh3tc2Q80VA5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.6■■□□□ 1.85
Sh3tc2Q80VA5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Sh3tc2Q80VA5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sh3tc2Q80VA5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sh3tc2Q80VA5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Sh3tc2Q80VA5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sh3tc2Q80VA5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.56■■□□□ 1.84
Sh3tc2Q80VA5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Sh3tc2Q80VA5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sh3tc2Q80VA5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Sh3tc2Q80VA5 Gm11175-201ENSMUST00000116172 543 ntBASIC26.54■■□□□ 1.84
Sh3tc2Q80VA5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sh3tc2Q80VA5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Sh3tc2Q80VA5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Sh3tc2Q80VA5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Sh3tc2Q80VA5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.52■■□□□ 1.84
Sh3tc2Q80VA5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sh3tc2Q80VA5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sh3tc2Q80VA5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3tc2Q80VA5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.49■■□□□ 1.83
Sh3tc2Q80VA5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sh3tc2Q80VA5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sh3tc2Q80VA5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.49■■□□□ 1.83
Sh3tc2Q80VA5 Mir6538-201ENSMUST00000183713 110 ntBASIC26.49■■□□□ 1.83
Sh3tc2Q80VA5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sh3tc2Q80VA5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sh3tc2Q80VA5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sh3tc2Q80VA5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sh3tc2Q80VA5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Sh3tc2Q80VA5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Sh3tc2Q80VA5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Sh3tc2Q80VA5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.45■■□□□ 1.82
Sh3tc2Q80VA5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Sh3tc2Q80VA5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3tc2Q80VA5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3tc2Q80VA5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3tc2Q80VA5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3tc2Q80VA5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3tc2Q80VA5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Sh3tc2Q80VA5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.42■■□□□ 1.82
Sh3tc2Q80VA5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.42■■□□□ 1.82
Sh3tc2Q80VA5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Sh3tc2Q80VA5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sh3tc2Q80VA5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.41■■□□□ 1.82
Sh3tc2Q80VA5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.41■■□□□ 1.82
Sh3tc2Q80VA5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sh3tc2Q80VA5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.4■■□□□ 1.82
Sh3tc2Q80VA5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Sh3tc2Q80VA5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Sh3tc2Q80VA5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Sh3tc2Q80VA5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Sh3tc2Q80VA5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.38■■□□□ 1.81
Sh3tc2Q80VA5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sh3tc2Q80VA5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Sh3tc2Q80VA5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Sh3tc2Q80VA5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.36■■□□□ 1.81
Sh3tc2Q80VA5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Sh3tc2Q80VA5 Cap2-205ENSMUST00000225824 1634 ntBASIC26.35■■□□□ 1.81
Sh3tc2Q80VA5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Sh3tc2Q80VA5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Sh3tc2Q80VA5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.33■■□□□ 1.81
Sh3tc2Q80VA5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sh3tc2Q80VA5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.33■■□□□ 1.8
Sh3tc2Q80VA5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Sh3tc2Q80VA5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Sh3tc2Q80VA5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.3■■□□□ 1.8
Sh3tc2Q80VA5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.3■■□□□ 1.8
Sh3tc2Q80VA5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sh3tc2Q80VA5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Sh3tc2Q80VA5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Sh3tc2Q80VA5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sh3tc2Q80VA5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Sh3tc2Q80VA5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Sh3tc2Q80VA5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sh3tc2Q80VA5 Zxda-201ENSMUST00000117281 2621 ntBASIC26.22■■□□□ 1.79
Sh3tc2Q80VA5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sh3tc2Q80VA5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sh3tc2Q80VA5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sh3tc2Q80VA5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sh3tc2Q80VA5 Gm6311-201ENSMUST00000073790 878 ntBASIC26.2■■□□□ 1.78
Sh3tc2Q80VA5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Sh3tc2Q80VA5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.19■■□□□ 1.78
Sh3tc2Q80VA5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Sh3tc2Q80VA5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sh3tc2Q80VA5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sh3tc2Q80VA5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sh3tc2Q80VA5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.16■■□□□ 1.78
Sh3tc2Q80VA5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sh3tc2Q80VA5 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.16■■□□□ 1.78
Sh3tc2Q80VA5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sh3tc2Q80VA5 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.15■■□□□ 1.78
Sh3tc2Q80VA5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Sh3tc2Q80VA5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms